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Linderman Lab

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  1. ssm ssm Public

    Bayesian learning and inference for state space models

    Jupyter Notebook 688 229

  2. S5 S5 Public

    Python 317 73

  3. PPSeq.jl PPSeq.jl Public

    Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains

    Julia 71 15

  4. ssm-jax ssm-jax Public

    Bayesian learning and inference for state space models (SSMs) using Google Research's JAX as a backend

    Jupyter Notebook 63 6

  5. sing sing Public

    SING: SDE Inference via Natural Gradients

    Python 36 4

  6. parallel-mcmc parallel-mcmc Public

    Parallelizing MCMC across the sequence length via Newton's method.

    Python 32 1

Repositories

Showing 10 of 32 repositories
  • lindermanlab.github.io Public

    Lab Homepage

    lindermanlab/lindermanlab.github.io’s past year of commit activity
    CSS 0 0 0 0 Updated Apr 4, 2026
  • parallelizing_with_lds Public

    Official repo for "A Unifying Framework for Parallelizing Sequential Models with Linear Dynamical Systems"

    lindermanlab/parallelizing_with_lds’s past year of commit activity
    Python 5 MIT 1 0 0 Updated Apr 3, 2026
  • micro_deer Public

    Very minimal implementation of DEER

    lindermanlab/micro_deer’s past year of commit activity
    Jupyter Notebook 9 MIT 2 0 0 Updated Mar 19, 2026
  • LL_dissertation_template Public

    Template for PhD Dissertations at Stanford University. Adapted from classicthesis by Andre Miede

    lindermanlab/LL_dissertation_template’s past year of commit activity
    TeX 0 GPL-2.0 0 0 0 Updated Mar 18, 2026
  • predictability_enables_parallelization Public

    Official repo for "Predictability Enables Parallelization of Nonlinear State Space Models" by Gonzalez*, Kozachkov*, et al. Published NeurIPS '25.

    lindermanlab/predictability_enables_parallelization’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Mar 6, 2026
  • elk Public

    Scalable and Stable Parallelization of Nonlinear RNNS

    lindermanlab/elk’s past year of commit activity
    Jupyter Notebook 30 BSD-3-Clause 2 0 0 Updated Mar 6, 2026
  • parallel-mcmc Public

    Parallelizing MCMC across the sequence length via Newton's method.

    lindermanlab/parallel-mcmc’s past year of commit activity
    Python 32 BSD-3-Clause 1 0 0 Updated Mar 2, 2026
  • gpslds Public

    Project repo for gpSLDS

    lindermanlab/gpslds’s past year of commit activity
    Jupyter Notebook 18 4 0 0 Updated Jan 12, 2026
  • dirichlet-tucker Public

    Tucker decompositions with normalization constraints

    lindermanlab/dirichlet-tucker’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jan 12, 2026
  • sing Public

    SING: SDE Inference via Natural Gradients

    lindermanlab/sing’s past year of commit activity
    Python 36 MIT 4 0 0 Updated Dec 9, 2025
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